STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_016342Putative DEP domain-containing protein 5. (1475 aa)    
Predicted Functional Partners:
SMAX5B_004729
Putative WD repeat-containing protein 59.
   
 0.999
SMAX5B_020730
Putative nitrogen permease regulator 3-like protein-like isoform 2.
    
 0.999
SMAX5B_020425
Putative WD repeat-containing protein 24-like.
    
 0.999
SMAX5B_018120
Putative WD repeat-containing protein mio isoform 2.
   
 0.999
SMAX5B_002253
Putative nitrogen permease regulator 2-like protein-like isoform 4.
    
 0.999
SMAX5B_010667
Putative integrin-alpha FG-GAP repeat-containing protein 2 isoform 2.
    
 0.994
SMAX5B_020668-2
Putative centrosomal protein of 192 kDa.
    
 0.994
SMAX5B_016418
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.994
SMAX5B_004116
Ras-related GTP binding A isoform 2.
    
 0.994
SMAX5B_008031
Putative UPF0536 protein C12orf66-like.
   
 0.993
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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