STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_016257Junctophilin; Junctophilins contribute to the formation of junctional membrane complexes (JMCs) which link the plasma membrane with the endoplasmic or sarcoplasmic reticulum in excitable cells. Provides a structural foundation for functional cross-talk between the cell surface and intracellular calcium release channels. (682 aa)    
Predicted Functional Partners:
SMAX5B_004261
Putative rab5 GDP/GTP exchange factor.
   
 0.719
SMAX5B_013500
Putative rab5 GDP/GTP exchange factor-like.
   
 0.719
SMAX5B_016549
Putative rab5 GDP/GTP exchange factor-like.
   
 0.719
SMAX5B_000286
Putative tonsoku-like protein-like isoform 2.
   
  0.509
ENSSMAP00000016008
annotation not available
  
 0.508
SMAX5B_019080
Putative ankyrin repeat and SOCS box protein 5-like.
  
 0.508
SMAX5B_004921
Putative ankyrin repeat and SOCS box protein 5-like.
  
 0.508
SMAX5B_018215
ANK_REP_REGION domain-containing protein.
  
 0.508
SMAX5B_018501
Putative ankyrin repeat and SOCS box protein 11-like.
  
 0.508
SMAX5B_008591
RAB5C member RAS oncogene family.
    
 0.491
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.