STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_001769Putative transmembrane protein 241. (298 aa)    
Predicted Functional Partners:
SMAX5B_017597
Putative histone H2A deubiquitinase MYSM1.
   
 
 0.646
SMAX5B_017590
Putative ankyrin repeat domain-containing protein 29-like isoform 2.
    
 
 0.556
SMAX5B_005173
Putative cadherin-22; Cadherins are calcium-dependent cell adhesion proteins.
      
 0.505
ZNF521
Putative zinc finger protein 521.
      
 0.457
SMAX5B_005939
Putative THO complex subunit 1.
      
 0.456
SMAX5B_021280
Putative 39S ribosomal protein L21 mitochondrial.
      
 0.428
SMAX5B_005498
Carbohydrate sulfotransferase.
      
 0.412
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.