STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_019902Putative ryanodine receptor 1-like. (5019 aa)    
Predicted Functional Partners:
SMAX5B_008245
Calmodulin isoform 2; Belongs to the calmodulin family.
    
 0.828
ENSSMAP00000019030
annotation not available
    
 0.828
SMAX5B_008647
Calmodulin; Belongs to the calmodulin family.
    
 0.828
ENSSMAP00000025079
annotation not available
    
 0.828
CALML6
Calmodulin like 6.
    
 0.812
ENSSMAP00000003412
annotation not available
    
 0.786
SMAX5B_008292
Peptidylprolyl isomerase.
    
 0.786
ENSSMAP00000022034
annotation not available
    
 0.786
SMAX5B_005814
Putative cAMP-dependent protein kinase catalytic subunit beta; Belongs to the protein kinase superfamily.
    
 0.781
ENSSMAP00000026353
annotation not available
    
 0.765
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.