STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_019817Putative rhomboid-related protein 4 isoform 2. (323 aa)    
Predicted Functional Partners:
SMAX5B_007542
Putative transitional endoplasmic reticulum ATPase-like; Belongs to the AAA ATPase family.
    
 
 0.889
SMAX5B_010967
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
    
 
 0.889
SPATA5
Putative spermatogenesis-associated protein 5.
    
 
 0.736
SMAX5B_012720
Putative spermatogenesis-associated protein 5-like protein 1 isoform 3.
    
 
 0.736
SMAX5B_004028
Phosphatidylinositol-glycan biosynthesis class W protein; Probable acetyltransferase, which acetylates the inositol ring of phosphatidylinositol during biosynthesis of GPI-anchor.
   
 
  0.618
SMAX5B_018465
Putative phosphatidylinositol N-acetylglucosaminyltransferase subunit A.
   
 
  0.618
SMAX5B_001137
Putative popeye domain-containing protein 2.
    
 
 0.556
ENSSMAP00000009215
Kelch-like family member 31.
      
 0.540
SMAX5B_021594
Putative heme-binding protein 1-like isoform 2.
     
 0.533
SMAX5B_000220
Putative transmembrane protein 214.
      
 0.528
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.