STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_016195DUF4541 domain containing protein. (133 aa)    
Predicted Functional Partners:
SMAX5B_014908
DUF3695 domain containing protein isoform 2.
  
   0.817
ENSSMAP00000003471
Cilia and flagella associated protein 161.
   
 
 0.787
SMAX5B_007941
Nucleoside diphosphate kinase 7; Belongs to the NDK family.
    
 
 0.777
SMAX5B_007598
Putative WD repeat-containing protein 16 isoform 2.
   
   0.761
SMAX5B_007661
Putative UPF0740 protein C1orf192-like.
   
   0.759
SMAX5B_015247
Homeobox domain-containing protein.
   
   0.756
SMAX5B_018137
Putative EF-hand domain-containing family member B.
   
   0.753
SMAX5B_000633
Putative coiled-coil domain-containing protein 19 mitochondrial.
   
   0.746
SMAX5B_022443
Uncharacterized protein.
   
   0.741
SMAX5B_017397
Tektin-3.
   
   0.733
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.