STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_018078Putative leucine-rich repeat-containing protein C10orf11-like. (266 aa)    
Predicted Functional Partners:
SMAX5B_021814
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.968
SMAX5B_015189
Small nuclear ribonucleoprotein Sm D3.
   
 0.964
SMAX5B_016248
Putative splicing factor 3A subunit 3.
   
 0.964
ENSSMAP00000005552
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.963
SMAX5B_015286
Small nuclear ribonucleoprotein G.
   
 0.959
SMAX5B_010605
Small nuclear ribonucleoprotein F.
   
 0.955
SMAX5B_003961
Splicing factor 3B subunit 3.
    
 0.955
SMAX5B_011038
Splicing factor 3 subunit 1.
   
 0.954
SMAX5B_020105
Putative PHD finger-like domain-containing protein 5A isoform 2.
   
 0.953
SMAX5B_010561
Putative splicing factor 3B subunit 2.
   
 0.951
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.