STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_016190Putative tRNA dimethylallyltransferase mitochondrial; Belongs to the IPP transferase family. (568 aa)    
Predicted Functional Partners:
SMAX5B_007965
Putative GTP-binding protein 6.
  
  
 0.930
SMAX5B_000518
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
    
 0.924
SMAX5B_001926
Putative isopentenyl-diphosphate Delta-isomerase 1.
    
 0.917
ENSSMAP00000002815
FtsJ RNA 2'-O-methyltransferase 1.
  
  
 0.907
SMAX5B_003455
Putative decaprenyl-diphosphate synthase subunit 2; Belongs to the FPP/GGPP synthase family.
  
 
 0.887
FTSJ3
pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
  
  
 0.882
SMAX5B_001878
Putative decaprenyl-diphosphate synthase subunit 1; Belongs to the FPP/GGPP synthase family.
  
 
 0.878
SMAX5B_008611
Putative rRNA methyltransferase 2 mitochondrial.
  
  
 0.860
SMAX5B_012283
Leukotriene A(4) hydrolase; Belongs to the peptidase M1 family.
      0.823
SMAX5B_022014
Putative ribonuclease-like.
  
  
 0.821
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.