STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_022488Putative R3H domain-containing protein 4 isoform 2. (381 aa)    
Predicted Functional Partners:
ERG28
Ergosterol biosynthetic protein 28.
   
 
 0.949
SMAX5B_007126
Putative lanosterol synthase-like.
   
 
 0.944
ENSSMAP00000028408
Lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase).
   
 
 0.944
SMAX5B_019716
Putative squalene synthase.
   
 
 0.904
SMAX5B_005281
Putative NADH dehydrogenase (Ubiquinone) complex I assembly factor 6 isoform 2.
   
 
 0.904
SMAX5B_009753
Putative cholesterol 25-hydroxylase-like protein 1 member 2; Belongs to the sterol desaturase family.
   
 0.860
SMAX5B_011585
Putative methylsterol monooxygenase 1; Belongs to the sterol desaturase family.
   
 0.860
SMAX5B_004187
Putative fatty acid hydroxylase domain-containing protein 2; Belongs to the sterol desaturase family.
   
 0.860
SMAX5B_016975
Putative cholesterol 25-hydroxylase-like protein 2; Belongs to the sterol desaturase family.
   
 0.860
SMAX5B_017808
Putative lathosterol oxidase-like; Belongs to the sterol desaturase family.
   
 0.860
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.