STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000034670Transmembrane protein 38A. (290 aa)    
Predicted Functional Partners:
ENSSMAP00000009215
Kelch-like family member 31.
   
  
 0.560
SMAX5B_017312
Leucine-rich repeat-containing protein 20 isoform 2.
   
 
 0.542
SMAX5B_022552
Putative transmembrane protein 161A.
      
 0.537
SMAX5B_019817
Putative rhomboid-related protein 4 isoform 2.
      
 0.514
SMAX5B_016431
Leucine-rich repeat-containing protein 38.
    
 
 0.505
SMAX5B_022469
Small integral membrane protein 7.
      
 0.504
PLPP7
Putative lipid phosphate phosphatase PPAPDC3.
   
  
 0.483
SMAX5B_000311
Putative dehydrogenase/reductase SDR family member 7; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  
 0.482
SMAX5B_022466
Putative transmembrane protein 221.
   
  
 0.468
SMAX5B_015512
Putative leucine-rich repeat-containing protein 14.
   
  
 0.464
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.