STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_011527Putative ubinuclein-1. (350 aa)    
Predicted Functional Partners:
SMAX5B_000768
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.982
SMAX5B_010993
Putative calcineurin-binding protein cabin-1-like.
   
 0.968
SMAX5B_020985
Histone chaperone asf1b-B.
    
 0.926
SMAX5B_007458
Histone chaperone asf1b-B.
    
 0.926
SMAX5B_017600
Putative SLAIN motif-containing protein 2.
   
 0.573
ENSSMAP00000000077
annotation not available
    
 0.559
SMAX5B_011519
Putative IQ domain-containing protein E.
    
 0.559
SMAX5B_012562
PL48 domain-containing protein.
    
 0.559
ENSSMAP00000001032
Si:dkey-65b12.6.
    
 0.559
SMAX5B_006556
Putative zonadhesin-like.
    
 0.559
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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