STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000428145_01586Unannotated protein. (249 aa)    
Predicted Functional Partners:
GCA_000428145_01463
Unannotated protein.
    
  0.775
GCA_000428145_00462
Unannotated protein.
  
     0.663
GCA_000428145_00461
Unannotated protein.
  
     0.657
GCA_000428145_00640
Unannotated protein.
  
     0.480
GCA_000428145_01587
Unannotated protein.
       0.473
GCA_000428145_01983
Unannotated protein.
  
     0.442
GCA_000428145_01585
Unannotated protein.
       0.419
GCA_000428145_01096
Unannotated protein.
 
     0.417
GCA_000428145_00475
Unannotated protein.
  
     0.407
Your Current Organism:
Chitinilyticum litopenaei
NCBI taxonomy Id: 529086
Other names: C. litopenaei DSM 21440, Chitinilyticum litopenaei DSM 21440, beta proteobacterium c1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.