STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000428145_02272Unannotated protein. (319 aa)    
Predicted Functional Partners:
GCA_000428145_00203
Unannotated protein.
 
 
 0.724
GCA_000428145_00345
Unannotated protein.
 
 
 0.721
GCA_000428145_03417
Unannotated protein.
 
 
 0.713
GCA_000428145_01882
Unannotated protein.
 
 
 0.701
GCA_000428145_02273
Unannotated protein.
 
     0.652
GCA_000428145_00132
Unannotated protein.
 
 
 0.628
GCA_000428145_02558
Unannotated protein.
 
 
 0.622
GCA_000428145_03366
Unannotated protein.
 
 
 0.574
GCA_000428145_00045
Unannotated protein.
 
 
 0.568
GCA_000428145_02274
Unannotated protein.
       0.566
Your Current Organism:
Chitinilyticum litopenaei
NCBI taxonomy Id: 529086
Other names: C. litopenaei DSM 21440, Chitinilyticum litopenaei DSM 21440, beta proteobacterium c1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.