STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS96060.1Lysophospholipase L1. (361 aa)    
Predicted Functional Partners:
SIS96029.1
Sialidase-1.
 
  
  0.883
SIS96075.1
Sialate O-acetylesterase.
 
     0.883
SIS96087.1
Arylsulfatase A.
 
     0.832
SIS96099.1
Glycosyl hydrolase family 20, domain 2.
 
     0.756
SIS96044.1
N-acylglucosamine 2-epimerase.
 
     0.707
SIS95866.1
F5/8 type C domain-containing protein.
  
  
  0.662
SIS95982.1
Starch-binding associating with outer membrane.
 
 
   0.653
SIS95852.1
Oxidoreductase family, NAD-binding Rossmann fold.
  
     0.614
SIS78604.1
Parallel beta-helix repeat (two copies).
  
 
   0.578
SIS95997.1
N-acetylneuraminate lyase; Belongs to the DapA family.
 
     0.572
Your Current Organism:
Belliella pelovolcani
NCBI taxonomy Id: 529505
Other names: B. pelovolcani, BCRC 17883, Belliella pelovolcani Arun et al. 2009, Belliella sp. CC-SAL-25, DSM 46698, KCTC 13248, strain CC-SAL-25
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