STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP08949.1Predicted dithiol-disulfide oxidoreductase, DUF899 family. (244 aa)    
Predicted Functional Partners:
SFP26989.1
Hypothetical protein.
 
     0.780
SFP08937.1
Glutathione S-transferase.
 
     0.779
SFP27005.1
Hypothetical protein.
 
     0.774
SFP50394.1
Transmembrane transcriptional regulator (anti-sigma factor RsiW).
  
     0.610
SFP08913.1
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase.
       0.488
SFP26960.1
Predicted metal-binding membrane protein.
 
     0.466
SFP75371.1
SnoaL-like domain-containing protein.
  
     0.433
Your Current Organism:
Frateuria terrea
NCBI taxonomy Id: 529704
Other names: CGMCC 1.7053, DSM 26515, F. terrea, Frateuria sp. VA24, Frateuria terrea Zhang et al. 2011, NBRC 104236, strain VA24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.