Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFP24995.1 | SFP36073.1 | SAMN02927913_1243 | SAMN02927913_1713 | Aromatic-amino-acid transaminase. | Aminopeptidase N. | 0.466 |
SFP24995.1 | SFP65940.1 | SAMN02927913_1243 | SAMN02927913_3088 | Aromatic-amino-acid transaminase. | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | 0.534 |
SFP24995.1 | glyA | SAMN02927913_1243 | SAMN02927913_0926 | Aromatic-amino-acid transaminase. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.473 |
SFP24995.1 | pepA | SAMN02927913_1243 | SAMN02927913_3369 | Aromatic-amino-acid transaminase. | Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.534 |
SFP36073.1 | SFP24995.1 | SAMN02927913_1713 | SAMN02927913_1243 | Aminopeptidase N. | Aromatic-amino-acid transaminase. | 0.466 |
SFP36073.1 | SFP56906.1 | SAMN02927913_1713 | SAMN02927913_2636 | Aminopeptidase N. | ATP-binding cassette, subfamily C. | 0.446 |
SFP36073.1 | SFP59899.1 | SAMN02927913_1713 | SAMN02927913_2819 | Aminopeptidase N. | Predicted metalloprotease, contains C-terminal PDZ domain. | 0.409 |
SFP36073.1 | SFP60760.1 | SAMN02927913_1713 | SAMN02927913_2867 | Aminopeptidase N. | Aminopeptidase N. | 0.419 |
SFP36073.1 | SFP65940.1 | SAMN02927913_1713 | SAMN02927913_3088 | Aminopeptidase N. | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | 0.400 |
SFP36073.1 | glyA | SAMN02927913_1713 | SAMN02927913_0926 | Aminopeptidase N. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.406 |
SFP36073.1 | pepA | SAMN02927913_1713 | SAMN02927913_3369 | Aminopeptidase N. | Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.400 |
SFP36073.1 | rapA | SAMN02927913_1713 | SAMN02927913_0528 | Aminopeptidase N. | ATP-dependent helicase HepA; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily. | 0.421 |
SFP56906.1 | SFP36073.1 | SAMN02927913_2636 | SAMN02927913_1713 | ATP-binding cassette, subfamily C. | Aminopeptidase N. | 0.446 |
SFP59899.1 | SFP36073.1 | SAMN02927913_2819 | SAMN02927913_1713 | Predicted metalloprotease, contains C-terminal PDZ domain. | Aminopeptidase N. | 0.409 |
SFP60760.1 | SFP36073.1 | SAMN02927913_2867 | SAMN02927913_1713 | Aminopeptidase N. | Aminopeptidase N. | 0.419 |
SFP60760.1 | SFP65940.1 | SAMN02927913_2867 | SAMN02927913_3088 | Aminopeptidase N. | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | 0.580 |
SFP60760.1 | glyA | SAMN02927913_2867 | SAMN02927913_0926 | Aminopeptidase N. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.585 |
SFP60760.1 | pepA | SAMN02927913_2867 | SAMN02927913_3369 | Aminopeptidase N. | Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.580 |
SFP60760.1 | rapA | SAMN02927913_2867 | SAMN02927913_0528 | Aminopeptidase N. | ATP-dependent helicase HepA; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily. | 0.421 |
SFP65940.1 | SFP24995.1 | SAMN02927913_3088 | SAMN02927913_1243 | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | Aromatic-amino-acid transaminase. | 0.534 |
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