STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP45892.1Protein of unknown function. (655 aa)    
Predicted Functional Partners:
SFP45874.1
Protein of unknown function DUF58.
  
 0.976
SFP45860.1
MoxR-like ATPase.
 
   
 0.946
SFP26250.1
LysM domain-containing protein.
  
     0.724
SFP21550.1
Type IV pilus assembly protein PilP.
  
     0.721
SFP21555.1
Type IV pilus assembly protein PilO.
  
     0.720
SFP21575.1
Type IV pilus assembly protein PilN.
  
     0.686
SFP45583.1
Type IV pilus assembly protein PilZ.
  
     0.681
SFP21588.1
Type IV pilus assembly protein PilM.
  
     0.667
SFP46579.1
Type IV pilus assembly protein PilY1.
  
     0.661
SFP46549.1
N-terminal methylation site-containing protein.
 
     0.659
Your Current Organism:
Frateuria terrea
NCBI taxonomy Id: 529704
Other names: CGMCC 1.7053, DSM 26515, F. terrea, Frateuria sp. VA24, Frateuria terrea Zhang et al. 2011, NBRC 104236, strain VA24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.