STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP47337.1Hypothetical protein. (123 aa)    
Predicted Functional Partners:
SFP47084.1
DNA binding domain-containing protein, excisionase family.
       0.773
SFP47102.1
Hypothetical protein.
       0.773
SFP47119.1
Hypothetical protein.
       0.773
SFP47131.1
Hypothetical protein; Manually curated.
       0.773
SFP47149.1
Endodeoxyribonuclease RusA.
       0.773
SFP47163.1
Protein of unknown function.
       0.773
SFP47182.1
Site-specific DNA-methyltransferase (adenine-specific); Belongs to the N(4)/N(6)-methyltransferase family.
       0.773
SFP47201.1
Hypothetical protein.
       0.773
SFP47220.1
Hypothetical protein.
       0.773
SFP47233.1
Hypothetical protein.
       0.773
Your Current Organism:
Frateuria terrea
NCBI taxonomy Id: 529704
Other names: CGMCC 1.7053, DSM 26515, F. terrea, Frateuria sp. VA24, Frateuria terrea Zhang et al. 2011, NBRC 104236, strain VA24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.