Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFP23274.1 | SFP51781.1 | SAMN02927913_1140 | SAMN02927913_2460 | Small conductance mechanosensitive channel. | Membrane protein, MarC family. | 0.432 |
SFP39019.1 | SFP51781.1 | SAMN02927913_1885 | SAMN02927913_2460 | Small-conductance mechanosensitive channel. | Membrane protein, MarC family. | 0.432 |
SFP51757.1 | SFP51781.1 | SAMN02927913_2459 | SAMN02927913_2460 | Putative hemolysin. | Membrane protein, MarC family. | 0.514 |
SFP51781.1 | SFP23274.1 | SAMN02927913_2460 | SAMN02927913_1140 | Membrane protein, MarC family. | Small conductance mechanosensitive channel. | 0.432 |
SFP51781.1 | SFP39019.1 | SAMN02927913_2460 | SAMN02927913_1885 | Membrane protein, MarC family. | Small-conductance mechanosensitive channel. | 0.432 |
SFP51781.1 | SFP51757.1 | SAMN02927913_2460 | SAMN02927913_2459 | Membrane protein, MarC family. | Putative hemolysin. | 0.514 |
SFP51781.1 | SFP51797.1 | SAMN02927913_2460 | SAMN02927913_2461 | Membrane protein, MarC family. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.494 |
SFP51781.1 | SFP51809.1 | SAMN02927913_2460 | SAMN02927913_2462 | Membrane protein, MarC family. | Monothiol glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily. | 0.494 |
SFP51797.1 | SFP51781.1 | SAMN02927913_2461 | SAMN02927913_2460 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Membrane protein, MarC family. | 0.494 |
SFP51797.1 | SFP51809.1 | SAMN02927913_2461 | SAMN02927913_2462 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Monothiol glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily. | 0.794 |
SFP51809.1 | SFP51781.1 | SAMN02927913_2462 | SAMN02927913_2460 | Monothiol glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily. | Membrane protein, MarC family. | 0.494 |
SFP51809.1 | SFP51797.1 | SAMN02927913_2462 | SAMN02927913_2461 | Monothiol glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.794 |