STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP56175.1Thiol:disulfide interchange protein DsbD. (729 aa)    
Predicted Functional Partners:
SFP74077.1
Thiol:disulfide interchange protein DsbC; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.
  
 
 0.984
SFP56194.1
Thiol-disulfide isomerase or thioredoxin.
  
 
 0.978
SFP79553.1
Protein-disulfide isomerase.
  
 
 0.927
SFP14969.1
Thiol-disulfide isomerase or thioredoxin.
  
 
 0.913
SFP08074.1
Cytochrome c biogenesis protein CcdA.
  
 
 0.893
SFP65303.1
Thiol-disulfide isomerase or thioredoxin; Manually curated.
  
 
 0.893
msrB
Peptide-methionine (R)-S-oxide reductase.
    
 
 0.872
msrA
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
    
 
 0.872
SFP08096.1
Peptide-methionine (R)-S-oxide reductase.
    
 
 0.872
msrA-2
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
    
 
 0.872
Your Current Organism:
Frateuria terrea
NCBI taxonomy Id: 529704
Other names: CGMCC 1.7053, DSM 26515, F. terrea, Frateuria sp. VA24, Frateuria terrea Zhang et al. 2011, NBRC 104236, strain VA24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.