STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP64265.1Polysaccharide deacetylase. (363 aa)    
Predicted Functional Partners:
SFP64257.1
O-antigen ligase like membrane protein.
 
     0.867
SFP64218.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.837
SFP64180.1
Hypothetical protein.
 
     0.777
SFP64233.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
     0.768
SFP64203.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
 
     0.729
SFP64408.1
Sugar transferase, PEP-CTERM system associated/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
   
 0.645
SFP50681.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
  
 
 0.622
SFP64164.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
  0.601
SFP74837.1
Exo-beta-1,3-glucanase, GH17 family.
  
 
 0.591
SFP56648.1
Glycosyl transferase family 2.
  
 
 0.565
Your Current Organism:
Frateuria terrea
NCBI taxonomy Id: 529704
Other names: CGMCC 1.7053, DSM 26515, F. terrea, Frateuria sp. VA24, Frateuria terrea Zhang et al. 2011, NBRC 104236, strain VA24
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