STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH23919.1Phospho-sugar mutase. (234 aa)    
Predicted Functional Partners:
AEH23918.1
NDP-sugar synthase.
 
  
 0.863
tmk
Thymidylate kinase.
     
 0.825
srp54
Signal recognition particle protein Srp54; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.
  
  
 0.804
AEH23923.1
Hypothetical protein.
 
     0.802
AEH23922.1
AsnC family transcriptional regulator.
       0.762
AEH23924.1
Transcriptional regulator, AsnC family.
       0.757
AEH25426.1
UTP-glucose-1-phosphate uridylyltransferase (galU).
    
 0.624
AEH23916.1
Hypothetical protein; Belongs to the UPF0292 family.
 
     0.617
AEH25205.1
Hypothetical protein.
  
     0.597
AEH25274.1
RNA-binding protein.
 
   0.566
Your Current Organism:
Pyrococcus yayanosii
NCBI taxonomy Id: 529709
Other names: P. yayanosii CH1, Pyrococcus sp. CH1, Pyrococcus yayanosii CH1, Pyrococcus yayanosii str. CH1, Pyrococcus yayanosii strain CH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.