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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH24554.1Pyridoxal-phosphate dependent enzyme superfamily. (389 aa)    
Predicted Functional Partners:
AEH24553.1
Cystathionine gamma-lyase.
  
 0.991
AEH24593.1
Cystathionine gamma-lyase.
  
 0.965
ahcY
S-adenosyl-L-homocysteine hydrolase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
  
 0.935
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with a modified folate serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta- hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
  
 
 0.932
AEH25062.1
Phosphoserine phosphatase (serB).
    
 0.921
AEH24594.1
Pyridoxal-phosphate dependent enzyme superfamily.
  
  
 
0.901
AEH25298.1
Ferredoxin 2.
     
  0.900
cysS
cysteinyl-tRNA synthetase.
  
 
 0.899
AEH23966.1
Homoserine dehydrogenase.
 
 
 0.877
AEH25353.1
Phosphoadenosine phosphosulfate reductase family protein.
  
  
 0.691
Your Current Organism:
Pyrococcus yayanosii
NCBI taxonomy Id: 529709
Other names: P. yayanosii CH1, Pyrococcus sp. CH1, Pyrococcus yayanosii CH1, Pyrococcus yayanosii str. CH1, Pyrococcus yayanosii strain CH1
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