STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH25219.1Hypothetical protein. (379 aa)    
Predicted Functional Partners:
AEH23791.1
UPF0278 family protein; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family.
 
     0.803
AEH25218.1
Putative glycerate kinase.
       0.784
lig
ATP-dependent DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair.
      
 0.606
AEH25220.1
Predicted ATPase, PP-loop superfamily.
       0.564
AEH25222.1
Family B-type DNA-dependent polymerase precursor.
 
    0.439
AEH25544.1
Hypothetical protein; Belongs to the UPF0216 family.
  
     0.414
Your Current Organism:
Pyrococcus yayanosii
NCBI taxonomy Id: 529709
Other names: P. yayanosii CH1, Pyrococcus sp. CH1, Pyrococcus yayanosii CH1, Pyrococcus yayanosii str. CH1, Pyrococcus yayanosii strain CH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.