STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIC46874.1Serine/threonine protein phosphatase. (417 aa)    
Predicted Functional Partners:
AIC46871.1
Protein kinase domain.
 
 0.996
AIC46870.1
Serine/threonine protein kinase.
 
 0.992
AIC46873.1
Bacterial cell division membrane protein; Cell elongation-specific peptidoglycan biosynthesis regulator RodA; Belongs to the SEDS family.
  
 0.985
AIC47675.1
Serine/threonine protein kinase.
 
 0.982
AIC46875.1
FHA domain protein.
 
 
 0.975
AIC46872.1
Cell division protein FtsI/penicillin-binding protein 2.
 
  
 0.968
AIC47553.1
tRNA and rRNA cytosine-C5-methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
 
 
 0.966
AIC46876.1
FHA domain protein.
 
 
 0.946
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
   0.774
AIC48170.1
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit.
    
 0.757
Your Current Organism:
Rhodoluna lacicola
NCBI taxonomy Id: 529884
Other names: Candidatus Rhodoluna lacicola, DSM 23834, LMG 26932, LMG:26932, R. lacicola, Rhodoluna lacicola Hahn et al. 2014, actinobacterium MWH-Ta8, strain MWH-Ta8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.