STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIC47777.1Hypothetical protein. (155 aa)    
Predicted Functional Partners:
AIC47775.1
Hypothetical protein.
       0.781
AIC47774.1
Fatty acid desaturase.
       0.773
AIC47776.1
Hypothetical protein.
       0.773
ychF
GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
       0.768
AIC47780.1
Hypothetical protein.
 
     0.567
AIC47779.1
DNA polymerase III, epsilon subunit-related 3'-5' exonuclease.
       0.563
AIC47386.1
Kef-type K+ transport systems, membrane component.
  
     0.450
AIC48126.1
EamA-like transporter family.
  
     0.438
AIC47773.1
Hypothetical protein.
       0.425
AIC47681.1
ATPases involved in chromosome partitioning.
  
     0.412
Your Current Organism:
Rhodoluna lacicola
NCBI taxonomy Id: 529884
Other names: Candidatus Rhodoluna lacicola, DSM 23834, LMG 26932, LMG:26932, R. lacicola, Rhodoluna lacicola Hahn et al. 2014, actinobacterium MWH-Ta8, strain MWH-Ta8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.