STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIC48153.1Hypothetical protein. (176 aa)    
Predicted Functional Partners:
AIC48152.1
Dyp-type peroxidase family.
 
    0.986
AIC47165.1
Uncharacterized protein, Cu resistance protein CopC-like protein.
  
    0.961
AIC47636.1
Cytochrome c, mono- and diheme variants.
  
 
 0.866
AIC47637.1
Rieske Fe-S protein; Menaquinol-cytochrome c reductase iron-sulfur subunit precursor.
   
 
 0.843
AIC47638.1
Cytochrome b subunit of the bc complex; Menaquinol-cytochrome c reductase cytochrome b subunit precursor.
   
 
 0.840
AIC47642.1
Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
  
   0.840
AIC47643.1
Cytochrome c oxidase, subunit II.
  
   0.839
AIC47641.1
Cytochrome c oxidase subunit IV; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
    
   0.815
AIC47635.1
Heme/copper-type cytochrome/quinol oxidase, subunit 3.
  
   0.794
dcd
Deoxycytidine triphosphate deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate.
       0.721
Your Current Organism:
Rhodoluna lacicola
NCBI taxonomy Id: 529884
Other names: Candidatus Rhodoluna lacicola, DSM 23834, LMG 26932, LMG:26932, R. lacicola, Rhodoluna lacicola Hahn et al. 2014, actinobacterium MWH-Ta8, strain MWH-Ta8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.