STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIC48166.1ABC-type Mn/Zn transport systems, ATPase component. (265 aa)    
Predicted Functional Partners:
AIC48165.1
ABC-type Mn2+/Zn2+ transport systems, permease component.
 
 0.999
AIC48167.1
ABC-type metal ion transport system, periplasmic component/surface adhesin.
  
 0.998
AIC48164.1
Fe2+/Zn2+ uptake regulation protein; Belongs to the Fur family.
  
  
 0.906
AIC48168.1
Putative transcriptional regulator with C-terminal CBS domains.
  
    0.550
rpmG
Ribosomal protein L33, bacterial type; Belongs to the bacterial ribosomal protein bL33 family.
     
 0.527
rpmB
Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
       0.494
rpsN
Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
       0.483
AIC47797.1
Hypothetical protein.
  
     0.409
Your Current Organism:
Rhodoluna lacicola
NCBI taxonomy Id: 529884
Other names: Candidatus Rhodoluna lacicola, DSM 23834, LMG 26932, LMG:26932, R. lacicola, Rhodoluna lacicola Hahn et al. 2014, actinobacterium MWH-Ta8, strain MWH-Ta8
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.