Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psta_0101TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: psp:PSPPH_3150 capsular polysaccharide biosynthesis protein. (468 aa)    
Predicted Functional Partners:
Psta_2416
KEGG: bpy:Bphyt_6272 glycosyl transferase, WecB/TagA/CpsF family; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; Belongs to the glycosyltransferase 26 family.
   
 0.943
Psta_2040
PFAM: polysaccharide export protein; KEGG: pfl:PFL_3082 polysaccharide biosynthesis/export protein.
 
  
 0.818
Psta_3922
PFAM: Nucleotidyl transferase; KEGG: sat:SYN_01031 mannose-1-phosphate guanylyltransferase.
 
  
 0.650
Psta_3842
PFAM: lipopolysaccharide biosynthesis protein; KEGG: ppd:Ppro_2880 lipopolysaccharide biosynthesis.
 
  
 0.600
Psta_4220
PFAM: glycosyl transferase group 1; KEGG: pla:Plav_1919 glycosyl transferase group 1.
 
  
 0.598
Psta_3567
PFAM: lipopolysaccharide biosynthesis protein; KEGG: ppd:Ppro_2880 lipopolysaccharide biosynthesis.
 
  
 0.597
Psta_3838
PFAM: glycosyl transferase family 2; KEGG: gbm:Gbem_1076 glycosyl transferase family 2.
 
    0.589
Psta_1075
PFAM: polysaccharide biosynthesis protein; KEGG: rsq:Rsph17025_3247 hypothetical protein.
 
  
 0.588
Psta_0526
PFAM: glycosyl transferase family 2; KEGG: mag:amb0125 glycosyltransferase.
 
    0.584
Psta_3839
PFAM: O-antigen polymerase; KEGG: O-antigen polymerase.
 
  
 0.565
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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