STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psta_02144-phytase; PFAM: extracellular solute-binding protein family 5; KEGG: sde:Sde_2028 oligopeptide ABC transporter periplasmic oligopeptide-binding protein. (677 aa)    
Predicted Functional Partners:
Psta_0215
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csa:Csal_3000 binding-protein-dependent transport systems inner membrane component.
 
 0.998
Psta_0217
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: bja:blr1356 peptide ABC transporter ATP- binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 0.995
Psta_0216
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr7599 ABC transporter, permease protein.
 
 0.994
Psta_0218
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: hch:HCH_00699 ABC-type oligopeptide transport system, ATPase component; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 0.993
Psta_2858
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_1184 dipeptide ABC transporter, permease protein.
  
 0.885
Psta_2294
Nickel-transporting ATPase; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: glo:Glov_2033 binding-protein-dependent transport systems inner membrane component.
  
 0.843
Psta_2859
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcz:BCZK4244 oligopeptide ABC transporter, permease.
  
 0.838
Psta_2295
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pca:Pcar_1867 ABC-type transport system protein.
  
 0.803
Psta_2857
PFAM: extracellular solute-binding protein family 5; KEGG: dde:Dde_1185 putative oligopeptide ABC transporter binding protein.
 
 
0.638
Psta_2296
PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bba:Bd1221 ABC-type dipeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
  
 0.623
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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