STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psta_0366PFAM: ATPase associated with various cellular activities AAA_5; ATPase associated with various cellular activities AAA_3; KEGG: mch:Mchl_1791 ATPase associated with various cellular activities AAA_5. (379 aa)    
Predicted Functional Partners:
Psta_0365
KEGG: dac:Daci_4845 hypothetical protein.
 
     0.951
Psta_0364
PFAM: VWA containing CoxE family protein; KEGG: pna:Pnap_3742 VWA containing CoxE family protein.
 
    0.921
Psta_0368
PFAM: zinc finger SWIM domain protein; KEGG: pna:Pnap_3737 zinc finger, SWIM domain protein.
 
     0.875
Psta_0367
Hypothetical protein; KEGG: afw:Anae109_3917 TPR repeat-containing protein.
       0.614
Psta_4428
KEGG: bcb:BCB4264_A3230 hypothetical cytosolic protein.
  
     0.567
Psta_2510
KEGG: mxa:MXAN_2319 hypothetical protein.
  
     0.522
Psta_2509
KEGG: scl:sce7146 hypothetical protein.
  
     0.443
Psta_0285
Hypothetical protein; KEGG: scl:sce7119 serine protease.
  
     0.434
Psta_0138
PFAM: WGR domain protein; SMART: WGR domain protein; KEGG: mxa:MXAN_2892 WGR domain protein.
 
     0.425
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.