Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Psta_0648 | Psta_0649 | Psta_0648 | Psta_0649 | PFAM: protein of unknown function DUF1105; KEGG: mxa:MXAN_6657 hypothetical protein. | PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: swi:Swit_1629 stress responsive alpha-beta barrel domain-containing protein. | 0.594 |
Psta_0648 | Psta_1353 | Psta_0648 | Psta_1353 | PFAM: protein of unknown function DUF1105; KEGG: mxa:MXAN_6657 hypothetical protein. | PFAM: Phytanoyl-CoA dioxygenase; KEGG: rso:RSc0983 hypothetical protein. | 0.557 |
Psta_0648 | Psta_1369 | Psta_0648 | Psta_1369 | PFAM: protein of unknown function DUF1105; KEGG: mxa:MXAN_6657 hypothetical protein. | PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: mxa:MXAN_4607 hypothetical protein. | 0.403 |
Psta_0648 | Psta_1647 | Psta_0648 | Psta_1647 | PFAM: protein of unknown function DUF1105; KEGG: mxa:MXAN_6657 hypothetical protein. | PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Peptidoglycan-binding domain 1 protein; beta-lactamase; KEGG: hypothetical protein. | 0.529 |
Psta_0648 | Psta_3955 | Psta_0648 | Psta_3955 | PFAM: protein of unknown function DUF1105; KEGG: mxa:MXAN_6657 hypothetical protein. | PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: sew:SeSA_B0050 NimC/NimA family protein. | 0.503 |
Psta_0648 | lysS | Psta_0648 | Psta_0647 | PFAM: protein of unknown function DUF1105; KEGG: mxa:MXAN_6657 hypothetical protein. | TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: bcr:BCAH187_A0088 lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.488 |
Psta_0649 | Psta_0648 | Psta_0649 | Psta_0648 | PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: swi:Swit_1629 stress responsive alpha-beta barrel domain-containing protein. | PFAM: protein of unknown function DUF1105; KEGG: mxa:MXAN_6657 hypothetical protein. | 0.594 |
Psta_1353 | Psta_0648 | Psta_1353 | Psta_0648 | PFAM: Phytanoyl-CoA dioxygenase; KEGG: rso:RSc0983 hypothetical protein. | PFAM: protein of unknown function DUF1105; KEGG: mxa:MXAN_6657 hypothetical protein. | 0.557 |
Psta_1369 | Psta_0648 | Psta_1369 | Psta_0648 | PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: mxa:MXAN_4607 hypothetical protein. | PFAM: protein of unknown function DUF1105; KEGG: mxa:MXAN_6657 hypothetical protein. | 0.403 |
Psta_1647 | Psta_0648 | Psta_1647 | Psta_0648 | PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Peptidoglycan-binding domain 1 protein; beta-lactamase; KEGG: hypothetical protein. | PFAM: protein of unknown function DUF1105; KEGG: mxa:MXAN_6657 hypothetical protein. | 0.529 |
Psta_3955 | Psta_0648 | Psta_3955 | Psta_0648 | PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: sew:SeSA_B0050 NimC/NimA family protein. | PFAM: protein of unknown function DUF1105; KEGG: mxa:MXAN_6657 hypothetical protein. | 0.503 |
lysS | Psta_0648 | Psta_0647 | Psta_0648 | TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: bcr:BCAH187_A0088 lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. | PFAM: protein of unknown function DUF1105; KEGG: mxa:MXAN_6657 hypothetical protein. | 0.488 |