Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psta_0767Conserved hypothetical protein; KEGG: sfu:Sfum_1622 40-residue YVTN family beta- propeller repeat protein. (601 aa)    
Predicted Functional Partners:
Psta_0687
Hypothetical protein; KEGG: sfu:Sfum_1622 40-residue YVTN family beta- propeller repeat protein.
 
 
0.843
Psta_0159
Cytochrome c peroxidase-like protein; KEGG: sfu:Sfum_1622 40-residue YVTN family beta- propeller repeat protein.
 
 
0.840
Psta_2934
SMART: PDZ/DHR/GLGF domain protein; KEGG: sus:Acid_4385 hypothetical protein.
 
  
 0.544
Psta_2909
PFAM: Glycosyl hydrolase family 98 putative carbohydrate binding module; SMART: Glycosyl hydrolase family 98 putative carbohydrate binding module; KEGG: slo:Shew_2289 glycosy hydrolase family protein.
 
    0.522
Psta_3849
PFAM: Cytochrome b/b6 domain; KEGG: scl:sce0365 cytochrome b6.
 
  
 0.519
Psta_1109
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dol:Dole_0347 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
  
 0.514
Psta_0969
Hypothetical protein; KEGG: mxa:MXAN_0776 von Willebrand factor type A domain protein.
  
     0.439
Psta_2321
DNA repair ATPase-like protein; KEGG: hypothetical protein.
  
     0.438
Psta_3491
PFAM: Protein of unknown function DUF1592; Protein of unknown function DUF1588; Protein of unknown function DUF1587; protein of unknown function DUF1585; KEGG: sus:Acid_1243 hypothetical protein.
 
   0.433
Psta_2722
PFAM: Glycosyl hydrolase family 98 putative carbohydrate binding module; SMART: Glycosyl hydrolase family 98 putative carbohydrate binding module; KEGG: slo:Shew_2289 glycosy hydrolase family protein.
 
    0.431
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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