Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Psta_0780Hypothetical protein; KEGG: sus:Acid_2373 calcium-binding EF-hand- containing protein. (631 aa)    
Predicted Functional Partners:
Psta_0781
PFAM: regulatory protein TetR; KEGG: gur:Gura_0817 TetR family transcriptional regulator.
       0.773
Psta_2354
PFAM: protein of unknown function DUF1549; KEGG: sus:Acid_5709 hypothetical protein.
  
    0.724
Psta_0782
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sfu:Sfum_2191 methyltransferase type 11.
       0.723
Psta_1285
PFAM: protein of unknown function DUF1549; KEGG: sus:Acid_5709 hypothetical protein.
  
     0.715
Psta_2382
PFAM: protein of unknown function DUF1549; KEGG: sus:Acid_5709 hypothetical protein.
  
     0.709
Psta_0197
PFAM: protein of unknown function DUF1501; KEGG: sus:Acid_5708 hypothetical protein.
  
     0.670
Psta_2383
PFAM: Planctomycete cytochrome C; SMART: WD-40 repeat protein; KEGG: sus:Acid_5710 WD-40 repeat-containing protein.
  
     0.670
Psta_2273
PFAM: Protein of unknown function DUF1588; PA14 domain protein; Protein of unknown function DUF1592; SMART: PA14 domain protein; KEGG: scl:sce1022 hypothetical protein.
 
  
 0.666
Psta_1489
PFAM: Protein of unknown function DUF1592; Protein of unknown function DUF1588; Protein of unknown function DUF1587; Protein of unknown function DUF1595; protein of unknown function DUF1585; KEGG: sus:Acid_4307 hypothetical protein.
  
     0.650
Psta_0308
PFAM: Protein of unknown function DUF1588; KEGG: mxa:MXAN_4108 putative lipoprotein.
  
     0.643
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.