STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psta_0816PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: glo:Glov_2089 ABC transporter related. (333 aa)    
Predicted Functional Partners:
Psta_2962
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gme:Gmet_2407 ABC transporter-related protein.
 
    
0.883
Psta_0817
KEGG: scl:sce0755 hypothetical protein.
  
   0.837
Psta_3294
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: noc:Noc_0539 ABC transporter, ATPase subunit.
 
    
0.699
Psta_4089
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: scl:sce4035 nitrate/nitrite ABC transporter ATP-binding protein.
 
    
0.698
Psta_3757
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: pca:Pcar_1259 ATP-binding transport protein; multicopy suppressor of HtrB.
  
  0.601
Psta_1768
KEGG: hch:HCH_04665 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
 
 0.568
Psta_0815
Hypothetical protein.
       0.564
Psta_3204
KEGG: ank:AnaeK_0667 hypothetical protein.
 
   0.559
cysA
Sulfate ABC transporter, ATPase subunit; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
 
    
0.520
Psta_4088
KEGG: scl:sce4034 nitrate/nitrite ABC transporter ATP-binding protein; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    
0.474
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.