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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
co-expression
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gene co-occurrence
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[Homology]
Score
Psta_0879TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: sus:Acid_3564 amine oxidase. (483 aa)    
Predicted Functional Partners:
Psta_0880
PFAM: Squalene/phytoene synthase; KEGG: sus:Acid_1266 farnesyl-diphosphate farnesyltransferase.
   
 0.991
Psta_0881
TIGRFAM: squalene synthase HpnC; PFAM: Squalene/phytoene synthase; KEGG: sus:Acid_1265 squalene/phytoene synthase.
 
   
 0.960
Psta_1738
TIGRFAM: squalene-hopene cyclase; squalene/oxidosqualene cyclase; PFAM: Prenyltransferase/squalene oxidase; KEGG: aba:Acid345_1740 squalene cyclase.
 
   
 0.714
Psta_1737
TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Radical SAM domain protein; KEGG: aba:Acid345_1015 Fe-S protein, radical SAM family.
 
  
 0.681
Psta_0882
KEGG: leucine-rich repeat family protein.
       0.570
Psta_0878
Hypothetical protein; KEGG: Ground-like domain containing protein.
       0.420
Psta_0174
PFAM: Prenyltransferase/squalene oxidase; KEGG: sfu:Sfum_1989 squalene-hopene cyclase.
 
   
 0.410
Psta_0883
PFAM: beta-lactamase domain protein; RNA- metabolising metallo-beta-lactamase; KEGG: dde:Dde_1781 metallo-beta-lactamase family protein.
       0.404
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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