Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psta_0938PFAM: RbsD or FucU transport; KEGG: pat:Patl_3642 RbsD or FucU transport; Belongs to the RbsD / FucU family. (148 aa)    
Predicted Functional Partners:
Psta_0939
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: atc:AGR_L_260 hypothetical protein.
 
     0.752
Psta_0937
PFAM: amidohydrolase 2; KEGG: hypothetical protein; K07046.
 
     0.730
Psta_0942
PFAM: aldo/keto reductase; KEGG: Os12g0482700; hypothetical protein.
 
     0.692
Psta_3883
PFAM: PA14 domain protein; SMART: PA14 domain protein; KEGG: sus:Acid_4385 hypothetical protein.
  
     0.686
Psta_0940
PFAM: Mannitol dehydrogenase rossman domain; Mannitol dehydrogenase domain; KEGG: uxuB; D-mannonate oxidoreductase protein; K00041 tagaturonate reductase.
     
 0.633
Psta_0941
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: csa:Csal_1736 alcohol dehydrogenase GroES-like protein.
 
     0.617
Psta_3010
PFAM: carbohydrate kinase FGGY; KEGG: sus:Acid_3424 carbohydrate kinase, FGGY.
 
  
 0.609
Psta_2220
KEGG: mmr:Mmar10_0854 hypothetical protein.
  
     0.554
Psta_1786
KEGG: bba:Bd1720 putative permease.
  
     0.513
Psta_3187
PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: mxa:MXAN_6169 oxidoreductase, zinc-binding dehydrogenase family.
 
     0.513
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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