STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psta_0941PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: csa:Csal_1736 alcohol dehydrogenase GroES-like protein. (342 aa)    
Predicted Functional Partners:
Psta_0940
PFAM: Mannitol dehydrogenase rossman domain; Mannitol dehydrogenase domain; KEGG: uxuB; D-mannonate oxidoreductase protein; K00041 tagaturonate reductase.
 
   
 0.827
Psta_0942
PFAM: aldo/keto reductase; KEGG: Os12g0482700; hypothetical protein.
 
  
 0.808
Psta_0939
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: atc:AGR_L_260 hypothetical protein.
 
     0.683
Psta_0851
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bha:BH0935 quinone oxidoreductase.
 
   
 0.641
Psta_0938
PFAM: RbsD or FucU transport; KEGG: pat:Patl_3642 RbsD or FucU transport; Belongs to the RbsD / FucU family.
 
     0.617
Psta_0937
PFAM: amidohydrolase 2; KEGG: hypothetical protein; K07046.
 
    0.576
Psta_3824
PFAM: AMP-dependent synthetase and ligase; aminotransferase class-III; aminotransferase class I and II; phosphopantetheine-binding; KEGG: mxa:MXAN_4601 non-ribosomal peptide synthase.
  
  
 0.507
Psta_3136
PFAM: FAD dependent oxidoreductase; Glycine cleavage T-protein barrel; glycine cleavage T protein (aminomethyl transferase); KEGG: sme:SM_b21534 putative dehydrogenase protein; Belongs to the GcvT family.
  
  
 0.408
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.