Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Psta_0971PFAM: lipolytic protein G-D-S-L family; KEGG: xcv:XCV0889 putative secreted protein. (312 aa)    
Predicted Functional Partners:
Psta_2878
KEGG: sus:Acid_6537 hypothetical protein.
 
     0.734
Psta_3244
Sialate O-acetylesterase; PFAM: protein of unknown function DUF303 acetylesterase putative; KEGG: sus:Acid_3201 sialate O-acetylesterase.
 
     0.702
Psta_3486
Sialate O-acetylesterase; PFAM: protein of unknown function DUF303 acetylesterase putative; KEGG: sus:Acid_3201 sialate O-acetylesterase.
  
     0.668
Psta_2754
PFAM: protein of unknown function DUF303 acetylesterase putative; KEGG: sus:Acid_3201 sialate O-acetylesterase.
  
     0.661
Psta_1239
PFAM: N-acylglucosamine 2-epimerase; KEGG: renin binding protein; K01787 N- acylglucosamine 2-epimerase.
 
     0.516
Psta_0972
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: acp:A2cp1_0427 oxidoreductase FAD/NAD(P)- binding domain protein.
       0.495
Psta_3734
PFAM: phospholipase/Carboxylesterase; KEGG: rfr:Rfer_1105 phospholipase/carboxylesterase.
 
     0.453
Psta_0970
Hypothetical protein; KEGG: GF17870 gene product from transcript GF17870- RA.
       0.417
Psta_3978
PFAM: major facilitator superfamily MFS_1; KEGG: swi:Swit_1636 major facilitator transporter.
  
     0.400
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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