Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Psta_0974PFAM: aldo/keto reductase; KEGG: oxidoreductase protein. (330 aa)    
Predicted Functional Partners:
Psta_3462
PFAM: aldo/keto reductase; KEGG: aba:Acid345_0577 aldo/keto reductase.
  
     0.548
Psta_0975
KEGG: nar:Saro_3164 glucose-methanol-choline oxidoreductase.
       0.546
Psta_1949
PFAM: histone deacetylase superfamily; KEGG: sus:Acid_0301 histone deacetylase superfamily protein.
   
  0.529
Psta_3010
PFAM: carbohydrate kinase FGGY; KEGG: sus:Acid_3424 carbohydrate kinase, FGGY.
 
     0.476
Psta_4633
PFAM: major intrinsic protein; KEGG: bca:BCE_A0165 MIP family channel protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
 
 0.468
Psta_4592
PFAM: protein of unknown function DUF1037; KEGG: atc:AGR_L_2958 probable ThuA protein, function.
  
     0.424
Psta_4753
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bha:BH0710 hypothetical protein.
 
    0.406
ychF
GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
       0.404
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.