STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psta_1204PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dac:Daci_4352 multi-sensor hybrid histidine kinase. (192 aa)    
Predicted Functional Partners:
Psta_0819
KEGG: dal:Dalk_3918 multi-sensor hybrid histidine kinase; TIGRFAM: ammonium transporter; PAS sensor protein; PFAM: Rh family protein/ammonium transporter; ATP- binding region ATPase domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; response regulator receiver.
  
 
 0.987
Psta_1198
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; KEGG: mag:amb3654 hypothetical protein; TIGRFAM: PAS sensor protein; PFAM: MCP methyltransferase CheR-type; CheB methylesterase; histidine kinase dimerisation and phosphoacceptor region; PAS fold-4 domain protein; ATP- binding region ATPase domain protein; PAS fold domain protein; SMART: MCP methyltransferase CheR-type; PAC repeat- containing protein; ATP-binding region ATPase domain protein; PAS domain containing protein.
  
 
 0.922
Psta_4291
KEGG: noc:Noc_2450 PAS sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; GAF domain protein; PAS domain containing protein.
 
 
 0.911
Psta_4529
KEGG: gsu:GSU2314 sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Forkhead-associated protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; Forkhead-associated protein; PAS domain containing protein.
  
 
 0.887
Psta_3072
KEGG: pzu:PHZ_c3236 methyl-accepting chemotaxis protein McpH; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: chemotaxis sensory transducer; PAC repeat- containing protein; histidine kinase HAMP region domain protein; PAS domain containing protein.
  
 
 0.886
Psta_3315
KEGG: bba:Bd2831 methyl-accepting chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; PAS domain containing protein.
  
 
 0.886
Psta_2067
CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Signal transducing histidine kinase homodimeric; Hpt domain protein; CheW domain protein; SMART: response regulator receiver; Hpt domain protein; ATP-binding region ATPase domain protein; CheW domain protein; KEGG: dps:DP2642 Che family two-component system sensory/regulatory protein.
  
 
 0.880
Psta_4289
KEGG: noc:Noc_2452 multisensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; response regulator receiver; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAC repeat-containing protein; histidine kinase A domain protein; PAS domain containing protein.
  
 
 0.871
Psta_1412
KEGG: rru:Rru_A2361 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein.
  
 
 0.870
Psta_4538
Multi-sensor signal transduction histidine kinase; KEGG: oca:OCAR_7132 sensor protein FixL; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein.
  
 
 0.668
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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