STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psta_1209Arsenite-activated ATPase ArsA; KEGG: azo:azo2356 arsenite-transporting ATPase; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; SMART: AAA ATPase. (593 aa)    
Predicted Functional Partners:
Psta_1210
PFAM: Arsenical resistance operon trans-acting repressor ArsD; KEGG: shn:Shewana3_2342 arsenical resistance operon trans-acting repressor ArsD.
   
 0.989
pyrF
TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: hne:HNE_0128 orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily.
    
 
 0.816
Psta_4632
PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: arsenate reductase ArsC; K03741 arsenate reductase.
    
 0.590
Psta_1211
Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: acp:A2cp1_1086 transcriptional regulator, ArsR family.
     
 0.528
Psta_3414
PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: ank:AnaeK_0302 AAA ATPase central domain protein.
  
 
 0.457
Psta_1925
PFAM: TrkA-C domain protein; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: noc:Noc_1175 TrkA-C, di- and tricarboxylate transporters.
   
 
 0.427
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.