Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Psta_1256PFAM: FAD dependent oxidoreductase; KEGG: sml:Smlt3457 putative D-amino acid dehydrogenase small subunit. (417 aa)    
Predicted Functional Partners:
Psta_1258
PFAM: dihydrodipicolinate synthetase; KEGG: rle:pRL100268 putative dihydrodipicolinate synthase; Belongs to the DapA family.
 
   
 0.927
Psta_1257
PFAM: proline racemase; KEGG: bmj:BMULJ_04062 proline racemase; Belongs to the proline racemase family.
 
   
 0.922
Psta_3019
Aspartate transaminase; PFAM: aminotransferase class I and II; KEGG: mmw:Mmwyl1_4445 aromatic amino acid aminotransferase.
     
 0.903
Psta_4235
PFAM: aminotransferase class I and II; aminotransferase class-III; aromatic amino acid beta- eliminating lyase/threonine aldolase; KEGG: bha:BH3350 hypothetical protein.
     
 0.900
hisC
TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
     
  0.900
thiG
Thiazole biosynthesis family protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
  
 0.779
Psta_0398
PFAM: Aldehyde Dehydrogenase; KEGG: xac:XAC2546 ketoglutarate semialdehyde dehydrogenase.
 
  
 0.633
Psta_1619
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SMART: Rhodanese domain protein; KEGG: sfu:Sfum_1398 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
   
 
 0.626
Psta_1255
PFAM: major facilitator superfamily MFS_1; KEGG: pmy:Pmen_4494 major facilitator transporter.
       0.556
Psta_1282
KEGG: hypothetical protein.
  
    0.551
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.