STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psta_1444KEGG: dol:Dole_2387 hypothetical protein. (472 aa)    
Predicted Functional Partners:
Psta_1442
KEGG: noc:Noc_1508 undecaprenyl-phosphate galactosephosphotransferase; TIGRFAM: Undecaprenyl-phosphate galactose phosphotransferase, WbaP; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
       0.773
Psta_1443
Hypothetical protein.
       0.773
Psta_1445
PFAM: polysaccharide biosynthesis protein; KEGG: nwi:Nwi_2754 polysaccharide biosynthesis protein.
       0.773
Psta_1446
KEGG: hypothetical protein.
       0.718
Psta_1447
PFAM: glycosyl transferase group 1; KEGG: rde:RD1_3845 glycosyl transferase, group 1 family protein.
       0.718
Psta_1438
KEGG: lip:LIC094 WblC protein.
       0.423
Psta_1439
PFAM: FAD dependent oxidoreductase; amine oxidase; KEGG: psp:PSPPH_0963 hypothetical protein.
       0.423
Psta_1440
PFAM: polysaccharide deacetylase; KEGG: scl:sce3134 putative polysaccharide deacetylase family protein.
       0.423
Psta_1441
KEGG: ppg:PputGB1_1391 UDP-N-acetylglucosamine 2- epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
       0.423
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.