Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psta_1464PFAM: peptidase M48 Ste24p; KEGG: hypothetical protein. (345 aa)    
Predicted Functional Partners:
Psta_1465
Hypothetical protein; KEGG: pap:PSPA7_0769 putative tail length determinator protein.
 
 
  0.891
Psta_1462
PFAM: Dynamin family protein; KEGG: sfu:Sfum_2910 dynamin family protein.
       0.773
Psta_1463
KEGG: hypothetical protein; K03497 chromosome partitioning protein, ParB family.
       0.773
Psta_1466
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: rpc:RPC_2994 sigma-24 (FecI-like).
       0.674
Psta_1467
KEGG: hypothetical protein.
       0.674
ftsH
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.594
ftsH-2
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; In the central section; belongs to the AAA ATPase family.
   
 0.594
Psta_3381
PFAM: biopterin transport-related protein BT1; KEGG: hypothetical protein.
  
     0.561
Psta_3386
KEGG: gur:Gura_0348 hypothetical protein.
   
 0.552
Psta_4428
KEGG: bcb:BCB4264_A3230 hypothetical cytosolic protein.
  
     0.517
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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