Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Psta_1522Hypothetical protein; KEGG: mxa:MXAN_4062 leucine-rich repeat domain protein. (303 aa)    
Predicted Functional Partners:
Psta_3501
Hypothetical protein; KEGG: mxa:MXAN_4062 leucine-rich repeat domain protein.
  
     0.767
Psta_3657
Hypothetical protein; KEGG: mxa:MXAN_4062 leucine-rich repeat domain protein.
  
     0.760
Psta_1523
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: dol:Dole_2627 methyltransferase type 11.
       0.732
Psta_1940
KEGG: predicted protein; K03006 DNA-directed RNA polymerase II subunit A.
  
     0.687
Psta_1329
PFAM: PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: glo:Glov_2175 hypothetical protein.
  
    0.667
Psta_0039
KEGG: hypothetical protein.
  
     0.635
Psta_0026
KEGG: Hypothetical protein CBG04553; K10695 E3 ubiquitin-protein ligase RNF1/2.
  
     0.607
Psta_3534
Hypothetical protein; KEGG: trans-sialidase.
  
     0.504
Psta_1524
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sus:Acid_5864 xylose isomerase domain- containing protein.
       0.502
Psta_0570
SMART: WD-40 repeat protein; KEGG: scl:sce3630 WD repeat-containing protein.
  
     0.492
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.