Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Psta_1684 | Psta_1685 | Hypothetical protein. | PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: csa:Csal_0918 PpiC-type peptidyl-prolyl cis- trans isomerase. | 0.572 |
Psta_1684 | Psta_1686 | Hypothetical protein. | KEGG: reh:H16_A2094 hypothetical protein. | 0.443 |
Psta_1685 | Psta_1684 | PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: csa:Csal_0918 PpiC-type peptidyl-prolyl cis- trans isomerase. | Hypothetical protein. | 0.572 |
Psta_1685 | Psta_1686 | PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: csa:Csal_0918 PpiC-type peptidyl-prolyl cis- trans isomerase. | KEGG: reh:H16_A2094 hypothetical protein. | 0.634 |
Psta_1686 | Psta_1684 | KEGG: reh:H16_A2094 hypothetical protein. | Hypothetical protein. | 0.443 |
Psta_1686 | Psta_1685 | KEGG: reh:H16_A2094 hypothetical protein. | PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: csa:Csal_0918 PpiC-type peptidyl-prolyl cis- trans isomerase. | 0.634 |
Psta_1686 | Psta_1687 | KEGG: reh:H16_A2094 hypothetical protein. | PFAM: GCN5-related N-acetyltransferase; KEGG: probable N-acetyltransferase MAK3. | 0.403 |
Psta_1686 | Psta_1785 | KEGG: reh:H16_A2094 hypothetical protein. | Hypothetical protein; KEGG: col15a1; collagen, type XV, alpha 1. | 0.413 |
Psta_1686 | Psta_1906 | KEGG: reh:H16_A2094 hypothetical protein. | PFAM: protein of unknown function DUF1559; KEGG: sus:Acid_5705 Tfp pilus assembly protein PilE-like protein. | 0.445 |
Psta_1687 | Psta_1686 | PFAM: GCN5-related N-acetyltransferase; KEGG: probable N-acetyltransferase MAK3. | KEGG: reh:H16_A2094 hypothetical protein. | 0.403 |
Psta_1785 | Psta_1686 | Hypothetical protein; KEGG: col15a1; collagen, type XV, alpha 1. | KEGG: reh:H16_A2094 hypothetical protein. | 0.413 |
Psta_1785 | Psta_1906 | Hypothetical protein; KEGG: col15a1; collagen, type XV, alpha 1. | PFAM: protein of unknown function DUF1559; KEGG: sus:Acid_5705 Tfp pilus assembly protein PilE-like protein. | 0.642 |
Psta_1906 | Psta_1686 | PFAM: protein of unknown function DUF1559; KEGG: sus:Acid_5705 Tfp pilus assembly protein PilE-like protein. | KEGG: reh:H16_A2094 hypothetical protein. | 0.445 |
Psta_1906 | Psta_1785 | PFAM: protein of unknown function DUF1559; KEGG: sus:Acid_5705 Tfp pilus assembly protein PilE-like protein. | Hypothetical protein; KEGG: col15a1; collagen, type XV, alpha 1. | 0.642 |