Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psta_1925PFAM: TrkA-C domain protein; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: noc:Noc_1175 TrkA-C, di- and tricarboxylate transporters. (610 aa)    
Predicted Functional Partners:
cysC-2
Sulfate adenylyltransferase, large subunit; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
 
  
 0.802
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
 
  
 0.582
Psta_1924
Glycogen debranching protein-like protein; KEGG: hypothetical protein.
       0.516
Psta_1926
PFAM: oxidoreductase domain protein; KEGG: aba:Acid345_4311 dehydrogenases related protein.
       0.453
Psta_0602
PFAM: Na+/solute symporter; KEGG: sus:Acid_1107 Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.439
Psta_3824
PFAM: AMP-dependent synthetase and ligase; aminotransferase class-III; aminotransferase class I and II; phosphopantetheine-binding; KEGG: mxa:MXAN_4601 non-ribosomal peptide synthase.
  
  
 0.434
Psta_1209
Arsenite-activated ATPase ArsA; KEGG: azo:azo2356 arsenite-transporting ATPase; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; SMART: AAA ATPase.
   
 
 0.431
Psta_0825
PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: gsu:GSU0261 sodium/hydrogen exchanger family protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
  
 0.427
Psta_1612
PFAM: NADPH-dependent FMN reductase; NAD(P)H dehydrogenase (quinone); KEGG: tmz:Tmz1t_0652 NADPH-dependent FMN reductase.
  
  
 0.419
Psta_1771
TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: cvi:CV_3561 cysteine synthase.
  
  
 0.407
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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