STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psta_1977Hypothetical protein; KEGG: bph:Bphy_5974 non-specific serine/threonine protein kinase. (293 aa)    
Predicted Functional Partners:
Psta_4291
KEGG: noc:Noc_2450 PAS sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; GAF domain protein; PAS domain containing protein.
   
 
 0.935
Psta_4097
PFAM: Osmosensitive K channel His kinase sensor; ATP-binding region ATPase domain protein; UspA domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mca:MCA2214 sensor histidine kinase KdpD.
   
 
 0.902
Psta_1802
Outer membrane protein-like protein; KEGG: hypothetical protein LOC758923.
  
     0.764
Psta_3853
PFAM: NolW domain protein; KEGG: hypothetical protein.
 
     0.763
Psta_1408
Glucuronate isomerase-like protein; KEGG: hypothetical protein.
  
     0.749
Psta_4283
PFAM: protein of unknown function DUF1549; Ig domain protein group 2 domain protein; KEGG: sus:Acid_5039 hypothetical protein.
  
     0.745
Psta_3883
PFAM: PA14 domain protein; SMART: PA14 domain protein; KEGG: sus:Acid_4385 hypothetical protein.
  
     0.742
Psta_4662
PFAM: O-antigen polymerase; KEGG: dps:DPPB82 related to polysaccharide transport proteins.
  
     0.695
Psta_3936
PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: mgm:Mmc1_1624 metal dependent phosphohydrolase.
  
     0.683
Psta_3664
PFAM: type II and III secretion system protein; NolW domain protein; KEGG: aci:ACIAD0294 putative general secretion pathway protein.
 
     0.681
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.