STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psta_2011PFAM: glycosyl transferase family 2; KEGG: ade:Adeh_2624 dolichyl-phosphate beta-D- mannosyltransferase. (261 aa)    
Predicted Functional Partners:
Psta_4574
PFAM: glycosyl transferase family 2; KEGG: oan:Oant_2752 glycosyl transferase family 2.
  
  
  0.967
Psta_1435
PFAM: glycosyl transferase family 2; KEGG: rpc:RPC_1645 dolichyl-phosphate beta-D- mannosyltransferase.
  
  
 
0.928
Psta_4320
PFAM: glycosyl transferase family 2; KEGG: mlo:mlr7556 sugar transferase.
  
     0.689
Psta_2021
PFAM: glycosyl transferase family 2; KEGG: gbm:Gbem_1110 glycosyl transferase family 2.
  
     0.626
Psta_2010
PFAM: major facilitator superfamily MFS_1; KEGG: pca:Pcar_2468 putative transport protein.
       0.535
Psta_2012
PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: pca:Pcar_0061 ABC-type transport system, permease component.
       0.485
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.